Installation

Metapathways can be installed with conda or obtained as a container. The fastest install is via Mamba (recommended) or by pulling down the container.

Note

Metapathways has been built and tested on Linux OS. Lightly tested on Mac OS. And not currently supported on native Windows.

Conda

conda create -n metapathways_env -c hallamlab -c bioconda -c conda-forge metapathways

Docker

docker pull quay.io/hallamlab/metapathways